Set and create directories in the configuration file

Usage

set_up_simulation(
  configure_run_file = "configure_run.yml",
  lake_directory,
  clean_start = FALSE,
  config_set_name = "default",
  sim_name = NA
)

Arguments

configure_run_file: name of run configuration file (do not include full path)
lake_directory: full path to repository directory
clean_start: logical: TRUE = reset run configuration with the file in the configuration directory within repository
config_set_name: name of configuration set
sim_name: name of simulation

Value

list of configuration values (Invisibly); side effect of creating necessary subdirectories in lake_directory

Examples

dir <- normalizePath(tempdir(),  winslash = "/")
lake_directory <- file.path(dir, "extdata")
# Copy files to temporarly directory
dir.create(dir,showWarnings = FALSE)
file.copy(system.file("extdata", package = "FLAREr"),
          tempdir(),
          recursive = TRUE)
#> [1] TRUE

set_up_simulation(configure_run_file = "configure_run.yml",
                  lake_directory = lake_directory,
                   clean_start = FALSE,
                   config_set_name = "default",
                   sim_name = NA)
#> Warning: NAs introduced by coercion
#> Warning: NAs introduced by coercion
#> Warning: NAs introduced by coercion
#> Warning: NAs introduced by coercion
#> Warning: NAs introduced by coercion